I-HjeMI
Type
Wild-Type
Target Sequence
-11 | -10 | -9 | -8 | -7 | -6 | -5 | -4 | -3 | -2 | -1 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 |
T | T | G | A | G | G | A | G | G | T | T | T | C | T | C | T | G | T | T | A | A | T |
FASTA Sequence
MGDLTYAYLVGLFEGDGYFSITKKGKYLTYELGIELSIKDVQLIYKIKDILGVGKVSFRKRNEIEMVSLRIRDKN
HLKNFILPIFDKYPMLSNKQYDYLRFKDALLSNIIYSDDLPEYARSNESINSVDSIINTSYFSAWLVGFIEAEGC
FSTYKLNKDDDYLIASFDIAQKDGDILISAIHKYLSFTTKIYLDKTNCSRLKVTGVRSVKNVVKFIQGAPVKLLG
NKKLQYKLWIKQLRKISRYSEKIQLPSNY
HLKNFILPIFDKYPMLSNKQYDYLRFKDALLSNIIYSDDLPEYARSNESINSVDSIINTSYFSAWLVGFIEAEGC
FSTYKLNKDDDYLIASFDIAQKDGDILISAIHKYLSFTTKIYLDKTNCSRLKVTGVRSVKNVVKFIQGAPVKLLG
NKKLQYKLWIKQLRKISRYSEKIQLPSNY
Crystal Structure
PDB File |
PyMOL File |
Position Weight Matrix
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Amino Acid Contact Modules
Module | Amino Acid Contact Modules (?) |
-11 → -9: | Lys 28*, Tyr 29 |
-8 → -6: | Ser 22, Thr 24, Lys 26, Thr 31, Glu 33, Lys 57, Ser 59, Arg 72, Arg 74 |
-6 → -4: | Tyr 20, Ser 22, Gly 35, Glu 37, Ser 59, Arg 61, Ser 70, Arg 72 |
-5 → -3: | Tyr 20, Gly 35, Glu 37, Arg 61, Glu 67*, Met 68, Ser 70, Arg 72 |
+3 → +5: | Cys 152, Ser 154, Asp 170, Ala 172, Asp 196*, Cys 200*, Arg 202 |
+4 → +6: | Ser 154, Tyr 156, Ser 168, Asp 170, Lys 192*, Tyr 194, Asp 196*, Lys 204 |
+6 → +8: | Tyr 156, Leu 158, Tyr 164*, Ile 166, Ser 168, Lys 192*, Thr 206 |
+9 → +11: | Leu 158, Tyr 164* |
Key
Experiment | |
Crystal Structure | |
Sequence Alignment | |
* | Uncertain |
Additional Information
Author: Barry StoddardNotes:
Date Added: 2012-01-30